DNA repair: structure, fonction and dynamic

Group leader: Bertrand CASTAING

Research theme

The organism’s life and its durability through up generation depend on the stability of the genetic material contained in its DNA double helix and on the dynamic behavior of DNA. Because of its electrophilic character, DNA is continuously exposed to the deleterious effects of chemical (oxidation, alkylation …) and physical (temperature, UV and gamma radiations …) agents which modify all its constitutive elements (base, sugar and phosphodiester backbone).
In many cases, DNA modifications interfere with DNA replication and lead to cell death or mutagenesis. Thereby, carcinogenesis and aging processes are often associated with the persistence of DNA lesions. To counteract these deleterious effects, the living organisms have evolved numerous DNA repair strategies which have been conserved from bacteria to higher eukaryotes. In addition, DNA transactions such as replication, transcription, recombination and repair are itself associated with the structural dynamics of DNA resulting from its interaction with “DNA chaperons”.
Within the framework, we focus our investigation on the molecular basis of the recognition and removal of oxidized bases by the DNA glycosylases, the enzymes which initiate the base excision repair pathway. In addition, we examine how the DNA chaperone-induced DNA super-structures can modulate the efficiency of DNA glycosylases.

DNA repair

On this theme, the main goal of the team is to elucidate at the atomic level the outstanding mechanisms by which DNA glycosylases (Fpg in bacteria and hOgg1 in Human) are able, among a vast excess of normal nucleobases, to detect, recognize and remove oxidized purines such as 8-oxguanine (mutagen lesion) and Fapy residus (mutagen and lethal lesions).
On the base of our biochemical studies, we have recently made a structural approach by crystallography of complexes enzyme/damaged DNA. By this last approach, we hope to design and synthesize selective inhibitors of these enzymes for anticancer therapy strategies.

DNA Chaperons

On this subject, we try to understand the precise role played by DNA chaperons in the structural dynamics of the bacterial and mitochondrial DNAs.
We conduct this approach by studying the DNA binding properties of the DNA chaperons MC1 (archeabacteria), HU (bacteria) and Abf2/Tfam (mitochondria) to linear or circular DNAs (supercoiled or relaxed).
We also study how the super structure of DNA can modulate the accessibility of DNA glycosylases (Fpg and hOgg1) to oxidized purines.

Publications


139 documents

Article dans une revue

  • Charlotte Rieux, Stéphane Goffinont, Franck Coste, Zahira Tber, Julien Cros, et al.. Thiopurine Derivative-Induced Fpg/Nei DNA Glycosylase Inhibition: Structural, Dynamic and Functional Insights. International Journal of Molecular Sciences, MDPI, 2020, 21 (6), pp.2058. ⟨10.3390/ijms21062058⟩. ⟨hal-02904772⟩
  • Alan Wacquiez, Franck Coste, Emmanuel Kut, Virginie Gaudon, Sascha Trapp, et al.. Structure and Sequence Determinants Governing the Interactions of RNAs with Influenza A Virus Non-Structural Protein NS1. Viruses, MDPI, 2020, 12 (9), 25 p. ⟨10.3390/v12090947⟩. ⟨hal-02948545⟩
  • Michel Blanc, Nicolas André, Olga Prieto-Ballesteros, Javier Gómez-Elvira, Geraint Jones, et al.. Joint Europa Mission (JEM) a multi-scale study of Europa to characterize its habitability and search for extant life. Planetary and Space Science, Elsevier, 2020, 104960 (in press). ⟨10.1016/j.pss.2020.104960⟩. ⟨insu-02883533⟩
  • Karine Loth, Justine Largillière, Franck Coste, Françoise Culard, Céline Landon, et al.. New protein-DNA complexes in archaea: a small monomeric protein induces a sharp V-turn DNA structure. Scientific Reports, Nature Publishing Group, 2019, 9 (1), ⟨10.1038/s41598-019-50211-2⟩. ⟨hal-02306224⟩
  • Abdennour Braka, Norbert Garnier, Pascal Bonnet, Samia Aci-Seche. Residence Time Prediction of Type 1 and 2 Kinase Inhibitors from Unbinding Simulations. Journal of Chemical Information and Modeling, American Chemical Society, 2019, 60 (1), pp.342-348. ⟨10.1021/acs.jcim.9b00497⟩. ⟨hal-02494409⟩
  • Zahira Tber, Nicolas Biteau, Luigi Agrofoglio, Julien Cros, Stéphane Goffinont, et al.. Microwave-Assisted Suzuki-Miyaura and Sonogashira Coupling of 4-Chloro-2-(trifluoromethyl)pyrido[1,2-e]purine Derivatives. European Journal of Organic Chemistry, Wiley-VCH Verlag, 2019, pp.5756-5767. ⟨10.1002/ejoc.201900921⟩. ⟨hal-02347523⟩
  • Martine Beaufour, David Ginguené, Rémy Le Meur, Bertrand Castaing, Martine Cadène. Liquid Native MALDI Mass Spectrometry for the Detection of Protein-Protein Complexes. Journal of The American Society for Mass Spectrometry, Springer Verlag (Germany), 2018, 29 (10), pp.1981-1994. ⟨10.1007/s13361-018-2015-x⟩. ⟨hal-01965971⟩
  • Serge Boiteux, Franck Coste, Bertrand Castaing. Repair of 8-oxo-7,8-dihydroguanine in prokaryotic and eukaryotic cells: Properties and biological roles of the Fpg and OGG1 DNA N -glycosylases. Free Radical Biology and Medicine, Elsevier, 2017, 107, pp.179 - 201. ⟨10.1016/j.freeradbiomed.2016.11.042⟩. ⟨hal-01618166⟩
  • François Hericourt, Françoise Chefdor, Ines Djeghdir, Mélanie Larcher, Florent Lafontaine, et al.. Functional Divergence of Poplar Histidine-Aspartate Kinase HK1 Paralogs in Response to Osmotic Stress. International Journal of Molecular Sciences, MDPI, 2016, 17 (12), ⟨10.3390/ijms17122061⟩. ⟨hal-01606532⟩
  • Laurent Jacob, Paul Sawma, Norbert Garnier, Lionel A.T. Meyer, Justine Fritz, et al.. Inhibition of PlexA1-mediated brain tumor growth and tumor-associated angiogenesis using a transmembrane domain targeting peptide. Oncotarget, Impact journals, 2016, ⟨10.18632/oncotarget.11072⟩. ⟨hal-01407022⟩
  • Rémy Le Meur, Karine Loth, Françoise Culard, Bertrand Castaing, Céline Landon. Backbone assignment of the three dimers of HU from Escherichia coli at 293 K: EcHUα2, EcHUβ2 and EcHUαβ. Biomolecular NMR Assignments, Springer, 2015, 9 (2), pp.359-363. ⟨10.1007/s12104-015-9610-6⟩. ⟨hal-01171467⟩
  • R. Le Meur, Françoise Culard, V. Nadan, S. Goffinont, F. Coste, et al.. The nucleoid-associated protein HU enhances 8-oxoguanine base excision by the formamidopyrimidine-DNA glycosylase. Biochemical Journal, Portland Press, 2015, 471 (1), pp.13-23. ⟨10.1042/BJ20150387⟩. ⟨hal-01216639⟩
  • F. d'Heygere, A. Schwartz, F. Coste, B. Castaing, M. Boudvillain. ATP-dependent motor activity of the transcription termination factor Rho from Mycobacterium tuberculosis. Nucleic Acids Research, Oxford University Press, 2015, 43, pp.6099-60111. ⟨10.1093/nar/gkv505⟩. ⟨hal-01171219⟩
  • Sylvie Baucheron-Monnier, Kunihiko Nishino, Isabelle Monchaux, Sylvie Canepa, Marie-Christine Maurel, et al.. Bile-mediated activation of the acrAB and tolC multidrug efflux genes occurs mainly through transcriptional derepression of ramA in [i]Salmonella enterica[/i] serovar Typhimurium. Journal of Antimicrobial Chemotherapy, Oxford University Press (OUP), 2014, 69 (9), pp.2400-2406. ⟨10.1093/jac/dku140⟩. ⟨hal-01129831⟩
  • Samia Aci-Sèche, Paul Sawma, Pierre Hubert, James N. Sturgis, Dominique Bagnard, et al.. Transmembrane Recognition of the Semaphorin Co-Receptors Neuropilin 1 and Plexin A1 : Coarse-Grained Simulations. PLoS ONE, Public Library of Science, 2014, 9 (5), pp.e97779. ⟨10.1371/journal.pone.0097779⟩. ⟨hal-01175479⟩
  • Françoise Paquet, Olivier Delalande, Stephane Goffinont, Françoise Culard, Karine Loth, et al.. Model of a DNA-protein complex of the architectural monomeric protein MC1 from Euryarchaea. PLoS ONE, Public Library of Science, 2014, 9 (2), pp.e88809. ⟨10.1371/journal.pone.0088809⟩. ⟨hal-01063974⟩
  • Alexia Arpel, Paul Sawma, Caroline Spenlé, Justine Fritz, Lionel Meyer, et al.. Transmembrane Domain Targeting Peptide Antagonizing ErbB2/Neu Inhibits Breast Tumor Growth and Metastasis.. Cell Reports, Elsevier Inc, 2014, 8 (6), pp.1714-1721. ⟨10.1016/j.celrep.2014.07.044⟩. ⟨hal-01071710⟩
  • E. Rusaouën, X. Riedinger, J.-C. Tisserand, F. Seychelles, J. Salort, et al.. Laminar and Intermittent flow in a tilted heat pipe. European Physical Journal E: Soft matter and biological physics, EDP Sciences: EPJ, 2014, 37 (1), pp.4. ⟨10.1140/epje/i2014-14004-7⟩. ⟨hal-01612392⟩
  • Widade Ziani, Antoine-P Maillard, Isabelle Petit-Härtlein, Norbert Garnier, Serge Crouzy, et al.. The X-ray structure of NccX from Cupriavidus metallidurans 31A illustrates potential dangers of detergent solubilization when generating and interpreting crystal structures of membrane proteins.. Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, 2014, 289 (45), pp.31160-31172. ⟨10.1074/jbc.M114.586537⟩. ⟨hal-01109416⟩
  • A. Biela, F. Coste, F. Culard, M. Guerin, S. Goffinont, et al.. Zinc finger oxidation of Fpg/Nei DNA glycosylases by 2-thioxanthine: biochemical and X-ray structural characterization. Nucleic Acids Research, Oxford University Press, 2014, 42 (16), pp.doi: 10.1093/nar/gku613. ⟨10.1093/nar/gku613⟩. ⟨hal-01175522⟩
  • Sophie Réhault-Godbert, Valérie Labas, Emmanuelle Helloin, Virginie Hervé-Grépinet, Cindy Slugocki, et al.. Ovalbumin-related Protein X Is a Heparin-binding Ov-Serpin Exhibiting Antimicrobial Activities.. Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, 2013, 288 (24), pp.17285-95. ⟨10.1074/jbc.M113.469759⟩. ⟨hal-00845174⟩
  • Violette Senille, Dominique Lelievre, Françoise Paquet, Norbert Garnier, Ned Lamb, et al.. The addressing fragment of mitogaligin: first insights into functional and structural properties.. ChemBioChem, Wiley-VCH Verlag, 2013, 14 (6), pp.711-20. ⟨10.1002/cbic.201200715⟩. ⟨hal-00817503⟩
  • Sylvie Baucheron, Franck Coste, Sylvie Canepa, Marie-Christine Maurel, Etienne Giraud, et al.. Binding of the RamR repressor to wild-type and mutated promoters of the RamA gene involved in efflux-mediated multidrug resistance in Salmonella enterica serovar Typhimurium.. Antimicrobial Agents and Chemotherapy, American Society for Microbiology, 2012, 56 (2), pp.942-8. ⟨10.1128/AAC.05444-11⟩. ⟨hal-00721770⟩
  • Franck Coste, Cordula Kemp, Vanessa Bobezeau, Charles Hetru, Christine Kellenberger, et al.. Crystal structure of Diedel, a marker of the immune response of Drosophila melanogaster.. PLoS ONE, Public Library of Science, 2012, 7 (3), pp.e33416. ⟨10.1371/journal.pone.0033416⟩. ⟨hal-00721829⟩
  • Béatrice Matot, Yann-Vaï Le Bihan, Rachel Lescasse, Javier Pérez, Simona Miron, et al.. The orientation of the C-terminal domain of the Saccharomyces cerevisiae Rap1 protein is determined by its binding to DNA.. Nucleic Acids Research, Oxford University Press, 2012, 40 (7), pp.3197-207. ⟨10.1093/nar/gkr1166⟩. ⟨hal-00720647⟩
  • L. Chevillard, B. Castaing, A. Arneodo, E. Leveque, J. F. Pinton, et al.. A phenomenological theory of Eulerian and Lagrangian velocity fluctuations in turbulent flows. Comptes Rendus Physique, Elsevier Masson, 2012, 13 (9-10), pp.899-928. ⟨10.1016/j.crhy.2012.09.002⟩. ⟨hal-01557081⟩
  • Nada Basbous, Franck Coste, Philippe Leone, Renaud Vincentelli, Julien Royet, et al.. The Drosophila peptidoglycan-recognition protein LF interacts with peptidoglycan-recognition protein LC to downregulate the Imd pathway. EMBO Reports, EMBO Press, 2011, 12 (4), pp.327-333. ⟨10.1038/embor.2011.19⟩. ⟨hal-00608209⟩
  • Samia Aci-Seche, Monique Genest, Norbert Garnier. Ligand entry pathways in the ligand binding domain of PPAR gamma receptor. FEBS Letters, Wiley, 2011, 585 (16), pp.2599-2603. ⟨10.1016/j.febslet.2011.07.014⟩. ⟨hal-00624897⟩
  • Norbert Garnier, Karine Loth, Franck Coste, Rafal Augustyniak, Virginie Nadan, et al.. An alternative flexible conformation of the E. coli HU beta(2) protein: structural, dynamics, and functional aspects. European Biophysics Journal, Springer Verlag (Germany), 2011, 40 (2), pp.117-129. ⟨10.1007/s00249-010-0630-y⟩. ⟨hal-00602370⟩
  • Yann Vei Le Bihan, Angeles M. Izquierdo, Franck Coste, Pierre Aller, Françoise Culard, et al.. 5-Hydroxy-5-methylhydantoin DNA lesion, a molecular trap for DNA glycosylases. Nucleic Acids Research, Oxford University Press, 2011, 39 (14), pp.6277-6290. ⟨10.1093/nar/gkr215⟩. ⟨hal-00614943⟩
  • M. Picard, S. Morisset, J.F. Cloix, J.C. Bizot, M. Guerin, et al.. Pharmacological, neurochemical, and behavioral profile of JB-788, a new 5-HT1A agonist. Neuroscience, Elsevier - International Brain Research Organization, 2010, 169 (3), pp.1337-1346. ⟨10.1016/j.neuroscience.2010.05.040⟩. ⟨hal-02071835⟩
  • Samia Aci-Sèche, Norbert Garnier, Stéphane Goffinont, Daniel Genest, Spotheim-Maurizot Mélanie, et al.. Comparing native and irradiated E. coli lactose repressor-operator complex by molecular dynamics simulation. European Biophysics Journal, Springer Verlag (Germany), 2010, 39 (10), pp.1375-1384. ⟨10.1007/s00249-010-0591-1⟩. ⟨hal-00529210⟩
  • Matthieu Fisichella, Hinda Dabboue, Sanjib Bhattacharyya, Gerald Lelong, Marie-Louise Saboungi, et al.. Uptake of Functionalized Mesoporous Silica Nanoparticles by Human Cancer Cells. Journal of Nanoscience and Nanotechnology, American Scientific Publishers, 2010, 10 (4), pp.314-2324. ⟨10.1166/jnn.2010.1917⟩. ⟨hal-00529333⟩
  • Yumiko Mishima, Franck Coste, Vanessa Bobezeau, Nadège Hervouet, Christine Kellenberger, et al.. Expression, purification, crystallization and preliminary X-ray analysis of the N-terminal domain of GNBP3 from Drosophila melanogaster. Acta crystallographica. Section F, Structural biology communications, John Wiley & Sons Ltd,, 2009, 65 (Part 9), pp.870-873. ⟨10.1107/S1744309109014997⟩. ⟨hal-00525123⟩
  • Samia Aci-Seche, Norbert Garnier, Daniel Genest, Stéphane Bourg, Christophe Marot, et al.. A Restrained Molecular Dynamics Empirical Approach for Generating a Small Set of Structures Representative of the Internal Flexibility of a Receptor. QSAR & Combinatorial Science, 2009, 28 (9), pp.959-968. ⟨10.1002/qsar.200910031⟩. ⟨hal-02904717⟩
  • Samia Aci-Seche, Norbert Garnier, Daniel Genest, Stéphane Bourg, Christophe Marot, et al.. Molecular Dynamics Empirical Approach for Generating a Small Set of Structures Representative of the Internal Flexibility of a Receptor. QSAR & Combinatorial Science, 2009, 28 (9), pp.959-968. ⟨hal-00521647⟩
  • Yumiko Mishima, Jessica Quintin, Vishukumar Aimanianda, Christine Kellenberger, Franck Coste, et al.. The N-terminal Domain of Drosophila Gram-negative Binding Protein 3 (GNBP3) Defines a Novel Family of Fungal Pattern Recognition Receptors. Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, 2009, 284 (42), pp.28687-28697. ⟨10.1074/jbc.M109.034587⟩. ⟨hal-00525135⟩
  • Oumarou Samna Soumana, Norbert Garnier, Monique Genest. Insight into the recognition patterns of the ErbB receptor family transmembrane domains: heterodimerization models through MD search. European Biophysics Journal, Springer Verlag (Germany), 2008, 37 (6), pp.851-864. ⟨10.1007/s00249-008-0293-0⟩. ⟨hal-00284330⟩
  • Daniel Genest, Norbert Garnier, Alban Arrault, Christophe Marot, Luc Morin-Allory, et al.. Ligand-escape pathways from the ligand-binding domain of PPAR gamma receptor as probed by molecular dynamics simulations. European Biophysics Journal, Springer Verlag (Germany), 2008, 37, pp.369-379. ⟨10.1007/s00249-007-0220-9⟩. ⟨hal-00512476⟩
  • Franck Coste, Matthias Ober, Yann-Vaï Le Bihan, Maria Angeles Izquierdo, Nadège Hervouet, et al.. Bacterial base excision repair enzyme Fpg recognizes bulky N7-substituted-FapydG lesion via unproductive binding mode.. Chemistry & Biology / Chemistry and Biology; CHEMISTRY & BIOLOGY, 2008, 15 (7), pp.706-17. ⟨10.1016/j.chembiol.2008.05.014⟩. ⟨hal-00408047⟩
  • Irina Gutsche, Andreja Vujicić-Zagar, Xavier Siebert, Pascale Servant, Françoise Vannier, et al.. Complex oligomeric structure of a truncated form of DdrA: A protein required for the extreme radiotolerance of Deinococcus.. Biochimica et Biophysica Acta - Molecular Cell Research, Elsevier, 2008, 1784 (7-8), pp.1050-8. ⟨10.1016/j.bbapap.2008.03.009⟩. ⟨hal-00297143⟩
  • Oumarou Samna Soumana, Norbert Garnier, Monique Genest. Molecular dynamics simulation approach for the prediction of transmembrane helix–helix heterodimers assembly. European Biophysics Journal, Springer Verlag (Germany), 2007, 36 (8), pp.1071-1082. ⟨10.1021/jm0702175 S0022-2623(07)00217-8⟩. ⟨hal-00166544⟩
  • Marie Davídková, Viktorie Stísová, Stéphane Goffinont, Nathalie Gillard, Bertrand Castaing, et al.. Modification of DNA radiolysis by DNA-binding proteins: structural aspects. Radiation Protection Dosimetry, Oxford University Press (OUP), 2006, 122 (1-4), pp.100-105. ⟨10.1093/rpd/ncl442⟩. ⟨hal-00168743⟩
  • Pierre Aller, Norbert Garnier, Monique Genest. Transmembrane Helix Packing of ErbB/Neu Receptor in Membrane Environment: A Molecular Dynamics Study. Journal of biomolecular structure & dynamics, 2006, 24 (3), pp.209-228. ⟨hal-00111939⟩
  • Stéphane Boiteux, Bertrand Castaing, J.P. Radicella. BER: (Base excision repair): molecular mechanisms and biological roles. Biofutur, Elsevier - Cachan : Lavoisier, 2006, 25 (271), pp.35-39. ⟨hal-00387927⟩
  • F. Coste, M. Ober, T. Carrell, S. Boiteux, C. Zelwer, et al.. Structural basis for the recognition of the FapydG lesion (2,6-diamino-4-hydroxy-5-formamidopyrimidine) by Formamidopyrimidine-DNA glycosylase. Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, 2006, 279 (42), pp.44074-44083. ⟨10.1074/jbc.M405928200⟩. ⟨hal-00114389⟩
  • C. BurÉ, B. Castaing, C. Lange, A.F. Delmas. Location and base selectivity on fragmentation of brominated oligodeoxynucleotides. Journal of Mass Spectrometry, Wiley-Blackwell, 2006, 41 (1), pp.84-90. ⟨10.1002/jms.967⟩. ⟨hal-00088837⟩
  • P. Aller, L. Voiry, Norbert Garnier, M. Genest. Molecular dynamics (MD) investigations of preformed structures of the transmembrane domain of the oncogenic Neu receptor dimer in a DMPC bilayer. Biopolymers, Wiley, 2005, 77, pp.184-197. ⟨hal-00088475⟩
  • M. BÉgusovÀ, N. Gillard, D. Sy, B. Castaing, M. Charlier, et al.. Radiolysis of DNA-protein complexes. Radiation Physics and Chemistry, Elsevier, 2005, 72, pp.265-270. ⟨hal-00088505⟩
  • S. Quevillon-Cheruel, N. Leulliot, M. Graille, N. Hervouet, F. Coste, et al.. Crystal structure of yeast YHR049W/FSH1, a member of the serine hydrolase family. Protein science : a publication of the Protein Society., 2005, 14, pp.1350-1356. ⟨hal-00088667⟩
  • O. Samna Soumana, P. Aller, Norbert Garnier, M. Genest. Transmembrane peptides from tyrosine kinase receptor. Mutation-related behavior in a lipid bilayer investigated by molecular dynamics simulations. Journal of biomolecular structure & dynamics, 2005, 23, pp.91-100. ⟨hal-00088672⟩
  • K. Pereira de Jesus, L. Serre, C. Zelwer, B. Castaing. Structural insights into abasic site for Fpg specific binding and catalysis: comparative high-resolution crystallographic studies of Fpg bound to various models of abasic site analogues containing DNA. Nucleic Acids Research, Oxford University Press, 2005, 33, pp.5936-5944. ⟨hal-00088666⟩
  • Patricia Amara, Laurence Serre, B. Castaing, A. Thomas. Insights into the DNA repair process by the formamidopyrimidine-DNA glycosylase investigated by molecular dynamics. Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, 2004, 13 (8), pp.2009-2021. ⟨10.1110/ps.04772404⟩. ⟨hal-00088335⟩
  • N. Gillard, M. BÉgusovÀ, B. Castaing, M. Spotheim-Maurizot. Radiation affects binding of Fpg repair protein to an abasic site containing DNA. Radiation Research, Radiation Research Society, 2004, 162, pp.566-571. ⟨10.1667/RR3247⟩. ⟨hal-00113044⟩
  • Charles Ramstein, Nadège Hervouet, Franck Coste, Charles Zelwer, Jacques Oberto, et al.. Evidence of a thermal unfolding dimeric intermediate for the Escherichia coli histone-like HU proteins: thermodynamics and structure.. Journal of Molecular Biology, Elsevier, 2003, 331 (1), pp.101-21. ⟨hal-02127656⟩
  • Norbert Garnier, Serge Crouzy, Monique Genest. Molecular Dynamics Simulations of the Transmembrane Domain of the Oncogenic ErbB2 Receptor Dimer in a DMPC Bilayer. Journal of Biomolecular Structure and Dynamics, Taylor & Francis: STM, Behavioural Science and Public Health Titles, 2003, 21 (2), pp.179-200. ⟨10.1080/07391102.2003.10506916⟩. ⟨hal-02123803⟩
  • E. Muller, D. Gasparutto, B. Castaing, A. Favier, J. Cadet. Recognition of cyclonucleoside lesions by the Lactococcus lactis FPG protein. Nucleosides, Nucleotides and Nucleic Acids, Taylor & Francis, 2003, 22, pp.1563-1565. ⟨hal-00088198⟩
  • V Kumar, Chantal Pichon, M. Refregiers, B Guerin, P. Midoux, et al.. Single histidine residue in head-group region is sufficient to impart remarkable gene transfection properties to cationic lipids: evidence for histidine-mediated membrane fusion at acidic pH. Gene Therapy, Nature Publishing Group, 2002, 10 (15), pp.1206 - 1215. ⟨10.1038/sj.gt.3301979⟩. ⟨hal-01596052⟩
  • Franck Coste, William Shepard, Charles Zelwer. Description of ordered solvent molecules in a platinated decanucleotide duplex refined at 1.6 Å resolution against experimental MAD phases. Acta Crystallographica Section D: Biological Crystallography, International Union of Crystallography, 2002, 58 (3), pp.431-440. ⟨10.1107/S0907444901021709⟩. ⟨hal-02127650⟩
  • Karine Pereira de Jésus, Laurence Serre, Nadège Hervouet, Véronique Bouckson-Castaing, Charles Zelwer, et al.. Crystallization and preliminary X-ray crystallographic studies of a complex between the Lactococcus lactis Fpg DNA-repair enzyme and an abasic site containing DNA. Acta Crystallographica Section D: Biological Crystallography, International Union of Crystallography, 2002, 58 (4), pp.679-682. ⟨10.1107/S0907444902001397⟩. ⟨hal-02141124⟩
  • Laurence Serre, Karine Pereira de Jésus, Serge Boiteux, Charles Zelwer, Bertrand Castaing. Crystal structure of the Lactococcus lactis formamidopyrimidine-DNA glycosylase bound to an abasic site analogue-containing DNA. EMBO Journal, EMBO Press, 2002, 21 (12), pp.2854-2865. ⟨10.1093/emboj/cdf304⟩. ⟨hal-02141118⟩
  • N Guibourt, Bertrand Castaing, P van der Kemp, S. Boiteux. Catalytic and DNA binding properties of the ogg1 protein of Saccharomyces cerevisiae: comparison between the wild type and the K241R and K241Q active-site mutant proteins.. Biochemistry, American Chemical Society, 2000, 39 (7), pp.1716-24. ⟨hal-02141126⟩
  • J-P Duneau, S. Crouzy, Norbert Garnier, Y. Chapron, M Genest. Molecular dynamics simulations of the ErbB-2 transmembrane domain within an explicit membrane environment: comparison with vacuum simulations.. Biophysical Chemistry, Elsevier, 1999, 76 (1), pp.35-53. ⟨hal-02123801⟩
  • Martial Thomas, Bertrand Castaing, Jean-Louis Fourrey, Charles Zelwer. Synthesis of an Enantiomerically Pure Carbocyclic DNA Abasic Site Analogue. Nucleosides and Nucleotides, 1999, 18 (2), pp.239-243. ⟨10.1080/15257779908043071⟩. ⟨hal-02141150⟩
  • Franck Coste, J.-M. Malinge, L. Serre, W. Shepard, M. Roth, et al.. Crystal structure of a double-stranded DNA containing a cisplatin interstrand cross-link at 1.63 A resolution: Hydration at the platinated site. Nucleic Acids Research, Oxford University Press, 1999, 27 (8), pp.1837-1846. ⟨10.1093/nar/27.8.1837⟩. ⟨hal-02127640⟩
  • Bertrand Castaing, Jean-Louis Fourrey, Nadege Hervouet-Coste, Martial Thomas, Serge Boiteux, et al.. AP site structural determinants for Fpg specific recognition. Nucleic Acids Research, Oxford University Press, 1999, 27 (2), pp.608-615. ⟨10.1093/nar/27.2.608⟩. ⟨hal-02141144⟩
  • Franck Coste, N. Hervouet, J. Oberto, C. Zelwer, Bertrand Castaing. Crystallization and preliminary X-ray diffraction analysis of the homodimeric form alpha2 of the HU protein from Escherichia coli.. Acta Crystallographica Section D: Biological Crystallography, International Union of Crystallography, 1999, 55 (Pt 11), pp.1952-4. ⟨hal-02127644⟩
  • F. ToulmÉ, M Guérin, N. Robichon, M. Leng, A. Rachid Rahmouni. In vivo evidence for back and forth oscillations of the transcription elongation complex. EMBO Journal, EMBO Press, 1999, 18 (18), pp.5052-5060. ⟨10.1093/emboj/18.18.5052⟩. ⟨hal-02127238⟩
  • Nicolas Sajot, Norbert Garnier, Monique Genest. Dimer models for ErbB-2/neu transmembrane domains from molecular dynamics simulations. Theoretical Chemistry Accounts: Theory, Computation, and Modeling, Springer Verlag, 1999, 101 (1-3), pp.67-72. ⟨10.1007/s002140050408⟩. ⟨hal-02123800⟩
  • J-P Duneau, Norbert Garnier, G Cremel, G Nullans, P. Hubert, et al.. Time resolved fluorescence properties of phenylalanine in different environments. Comparison with molecular dynamics simulation.. Biophysical Chemistry, Elsevier, 1998, 73 (1-2), pp.109-19. ⟨hal-02123796⟩
  • M Guerin, N. Robichon, J. Geiselmann, A. Rachid Rahmouni. A simple polypyrimidine repeat acts as an artificial Rho-dependent terminator in vivo and in vitro. Nucleic Acids Research, Oxford University Press, 1998, 26 (21), pp.4895-4900. ⟨10.1093/nar/26.21.4895⟩. ⟨hal-02127232⟩
  • N. Figueroa-Bossi, M Guérin, A. Rachid Rahmouni, M Leng, L Bossi. The supercoiling sensitivity of a bacterial tRNA promoter parallels its responsiveness to stringent control. EMBO Journal, EMBO Press, 1998, 17 (8), pp.2359-2367. ⟨10.1093/emboj/17.8.2359⟩. ⟨hal-02127234⟩
  • Norbert Garnier, Daniel Genest, Jean Pierre Duneau, Monique Genest. Molecular modeling of c-erbB2 receptor dimerization: Coiled-coil structure of wild and oncogenic transmembrane domains—Stabilization by interhelical hydrogen bonds in the oncogenic form. Biopolymers, Wiley, 1997, 42 (2), pp.157-168. ⟨10.1002/(SICI)1097-0282(199708)42:2<157::AID-BIP5>3.0.CO;2-M⟩. ⟨hal-02123792⟩
  • Jean-Pierre Duneau, Norbert Garnier, Monique Genest. Insight into Signal Transduction: Structural Alterations in Transmembrane Helices Probed by Multi-1 ns Molecular Dynamics Simulations. Journal of Biomolecular Structure and Dynamics, Taylor & Francis: STM, Behavioural Science and Public Health Titles, 1997, 15 (3), pp.555-572. ⟨10.1080/07391102.1997.10508966⟩. ⟨hal-02123789⟩
  • Marc Boudvillain, Martine Guerin, Rozenn Dalbiès, Tula Saison-Behmoaras, Marc Leng. Transplatin-Modified Oligo(2‘- O -methyl ribonucleotide)s: A New Tool for Selective Modulation of Gene Expression †. Biochemistry, American Chemical Society, 1997, 36 (10), pp.2925 - 2931. ⟨10.1021/bi962695f⟩. ⟨hal-01880625⟩
  • A. Arneodo, Christian Baudet, F. Belin, R. Benzi, B. Castaing, et al.. Structure functions in turbulence, in various flow configurations, at Reynolds number between 30 and 5000, using extended self-similarity. EPL - Europhysics Letters, European Physical Society/EDP Sciences/Società Italiana di Fisica/IOP Publishing, 1996, 34 (6), pp.411-416. ⟨10.1209/epl/i1996-00472-2⟩. ⟨hal-01557131⟩
  • Norbert Garnier, D. Genest, M Genest. Correlated motions and propagation of the effect of a local conformational change in the transmembrane helix of the c-erb B2 encoded protein and its V659E mutant, studied by molecular dynamics simulations.. Biophysical Chemistry, Elsevier, 1996, 58 (3), pp.225-37. ⟨hal-02123788⟩
  • M Guérin, M. Leng, A. Rachid Rahmouni. High resolution mapping of E.coli transcription elongation complex in situ reveals protein interactions with the non-transcribed strand.. EMBO Journal, EMBO Press, 1996, 15 (19), pp.5397-5407. ⟨hal-02127225⟩
  • Bertrand Castaing, Charles Zelwer, Jacques Laval, Serge Boiteux. HU Protein of Escherichia coli Binds Specifically to DNA That Contains Single-strand Breaks or Gaps. Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, 1995, 270 (17), pp.10291-10296. ⟨10.1074/jbc.270.17.10291⟩. ⟨hal-02141159⟩
  • Norbert Garnier, Daniel Genest, Eric Hebert, Monique Genest. Influence of a Mutation in the Transmembrane Domain of the pl85 c- erb B2 Oncogene-Encoded Protein Studied by Molecular Dynamics Simulations. Journal of Biomolecular Structure and Dynamics, Taylor & Francis: STM, Behavioural Science and Public Health Titles, 1994, 11 (5), pp.983-1002. ⟨10.1080/07391102.1994.10508047⟩. ⟨hal-02123785⟩
  • Bertrand Castaing, Serge Boiteux, Charles Zelwer. DNA containing a chemically reduced apurinic site is a high affinity ligand for the E.coli formamidopyrimidine-DNA glycosyiase. Nucleic Acids Research, Oxford University Press, 1992, 20 (3), pp.389-394. ⟨10.1093/nar/20.3.389⟩. ⟨hal-02141191⟩

Communication dans un congrès

  • Justine Largillière, Rémy Le Meur, David Guiguène, Norbert Garnier, Celine Landon, et al.. Vers une description cinétique et structurale complète du mécanisme d'échange de chaînes de la protéine HU d'Escherichia coli.. XXXIe congrès du GERM (Groupement d'Etudes de Résonance Magnétique), May 2019, Oléron, France. ⟨hal-02361645⟩
  • Bertrand Castaing. Inhibition des ADN glycosylases de la super famille structurale Fpg/Nei par des thiopurines: relations structure-activité. Journée scientifique de la Fédération de Recherche 2708, Apr 2019, Orléans, France. ⟨hal-02903112⟩
  • J. Cros, F. Coste, S. Goffinont, Virginie Nadan, V. Roy, et al.. Discovery and characterization of inhibitors of the DNA repair enzymes hNEIL1 and hOGG1, pertinent therapeutic targets for cancer therapy. Laboratoire International Associé, Jun 2019, Varsovie, Poland. ⟨hal-02903108⟩
  • A. Wacquiez, F. Coste, V. Nadan, E. Kut, Norbert Garnier, et al.. Interaction de la protéine NS1 avec l’ARN : mécanismes impliqués dans la reconnaissance spécifique. Colloque annuel de ResaFlu, Réseau français sur les virus Influenza, Mar 2019, Lyon, France. ⟨hal-02903093⟩
  • Bertrand Castaing. Les ADN glycosylases qui initient le système de réparation de l'ADN par excision de base, de nouvelles cibles potentielles pour lutter contre le cancer. Colloque du Réseau « Molécules marines, métabolisme et cancer » du Canréropôle Grand Ouest, May 2019, Mansigné, France. ⟨hal-02903074⟩
  • Béatrice Vallée, S. Routier, A. Cosson, M. Doudeau, F. Godin, et al.. Développement de modulateurs des LIM kinases. Cancéropôle Grand Ouest - 14e colloque du Réseau Produits de la mer en cancérologie - 5e colloque du Réseau Canaux ioniques et cancer, May 2018, Mansigné, France. ⟨hal-02928559⟩
  • A. Braka, S. Aci-Sèche, Bourg Stéphane, Norbert Garnier, P. Bonnet. Impact and prediction of binding kinetics on in vivo drug efficacy. 5th EFMC Young Medical Chemist Symposium, Sep 2018, Ljubljana, Slovenia. ⟨hal-02903060⟩
  • Béatrice Vallée, K. Plé, A. Cosson, M. Doudeau, F. Godin, et al.. Développement de petites molécules inhibitrices des LIM kinases, nouvelles cibles thérapeutiques pour lutter contre le cancer, les maladies neurologiques et la neurofibromatose. Journée Fédération CBM-ICOA, Jan 2018, Orléans, France. ⟨hal-02928530⟩
  • J. Cros, F. Coste, Z. Tber, S. Goffinont, Virginie Nadan, et al.. Small molecule inhibitors of the human DNA glycosylases hOGG1 and NEIL1, pertinent therapeutic targets in cancer and neurodegenerative disease therapies. 25th Young Research Fellows Meeting, Mar 2018, Orléans, France. ⟨hal-02903084⟩
  • Sophie Rehault Godbert, Valérie Labas, Magali Chessé, Joël Gautron, Franck Coste, et al.. L’ovalbumin-related protein X (OVAX) est une protéine apparentée à l'ovalbumine qui possède des activités antibactériennes. 11.Journées de la Recherche Avicole et Palmidèdes à Foie Gras, Apr 2015, Tours, France. ⟨hal-02740850⟩
  • Daniel Marc, Franck Coste, Bertrand Castaing. Des cristaux pour la recherche de nouveaux antiviraux. Journées d'Animation Scientifique de la Fédération de Recherche d'Infectiologie (FéRI), Oct 2015, Orléans, France. 17 diapositives. ⟨hal-02792217⟩
  • E. Le Guen, R. Fabbro, F. Coste, M. Carin, P. Le Masson. physical study of hybrid Nd : Yag laser. ICALEO 2009 congress proceeding, Nov 2009, France. pp.1-6. ⟨hal-00600943⟩

Poster

  • Justine Largillière, Rémy Le Meur, David Guinguène, Norbert Garnier, Celine Landon, et al.. To a complete kinetics and structural description of the EcHU chain exchange system.. Journée Fédération de recherche “Physique et Chimie du Vivant”, Apr 2019, Orléans, France. ⟨hal-02362578⟩
  • Justine Largillière, Rémy Le Meur, David Guinguène, Norbert Garnier, Celine Landon, et al.. To a complete kinetics and structural description of the EcHU chain exchange system. NMR : a tool for biology XITh, Jan 2019, Paris, France. ⟨hal-02362588⟩
  • J. Cros, F. Coste, S. Goffinont, V. Gaudon, V. Roy, et al.. Search for small molecule inhibitors of the DNA repair enzymes hNEIL1 and hOGG1, potential therapeutic targets in cancer. Journée Fédération de recherche “Physique et Chimie du Vivant” FR2708 (CBM/ICOA), Apr 2019, Orléans, France. ⟨hal-02903223⟩
  • Béatrice Vallée, A. Cosson, M. Doudeau, F. Godin, A. Champiré, et al.. LIM kinases, new therapeutic targets to treat cancers, neurological disorders and Neurofibromatosis: development of small molecule inhibitors. FEBS Meeting 2019, Jul 2019, Cracovie, Poland. ⟨hal-02924140⟩
  • F. Coste, G. Chaume, J.-B. Madinier, I. Rahioui, B. Castaing, et al.. Incorporation of trifluoromethylated pseudoproline in an entomotoxic knottin: effects on oxidative folding, 3D structure and biological activity. 21e réunion du Groupe Français des Peptides et des Protéines (GFPP21), May 2019, Amboise, France. ⟨hal-02893471⟩
  • J. Cros, F. Coste, S. Goffinont, V. Gaudon, V. Roy, et al.. Search for small molecule inhibitors of the DNA repair enzymes hNEIL1 and hOGG1, potential therapeutic targets in cancer. 13th French 3R meeting, May 2019, Presqu’île de Giens, France. ⟨hal-02903219⟩
  • Daniel Marc, Alan Wacquiez, Stéphane Goffinont, Virginie Nadan, Franck Coste, et al.. Interaction de la protéine NS1 des virus influenza A avec l’ARN : mécanismes impliqués dans la reconnaissance spécifique. 21. Journées Francophones de Virologie, Mar 2019, Lyon, France. Virologie, 23, 2019. ⟨hal-02737761⟩
  • Justine Largillière, Rémy Le Meur, David Guinguène, Celine Landon, A.F. Delmas, et al.. First kinetics description of the EcHU chain exchange system.. 28th ICMRBS - International Council on Magnetic Resonance in Biological Systems, Aug 2018, Dublin, Ireland. ⟨hal-02362586⟩
  • Karine Loth, Justine Largillière, Franck Coste, Françoise Culard, Bertrand Castaing, et al.. New protein-DNA complexes in archaea: a small monomeric protein induces a V-turn structure.. 28th ICMRBS - International Council on Magnetic Resonance in Biological Systems, Aug 2018, Dublin, Ireland. ⟨hal-02362584⟩
  • Justine Largillière, Rémy Le Meur, Norbert Garnier, Celine Landon, A.F. Delmas, et al.. Native and Intermediate conformations of the three HU dimers of E.coli.. 28th ICMRBS - International Council on Magnetic Resonance in Biological Systems, Aug 2018, Dublin, Ireland. ⟨hal-02362585⟩
  • Karine Loth, Françoise Culard, Justine Largillière, Celine Landon, Bertrand Castaing, et al.. New protein-DNA complexes in archaea: a monomeric protein induces a U-turn structure.. 5e séminaire scientifique du LIA MiR-TANGo, May 2018, Orléans, France. ⟨hal-02362804⟩
  • Justine Largillière, Rémy Le Meur, Martine Cadene, Bertrand Castaing, Karine Loth, et al.. Premières études cinétiques du mécanisme d’échange de chaînes de la protéine HU d’Escherischia coli.. Journée Fédération de recherche “Physique et Chimie du Vivant”, Jan 2018, Orléans, France. ⟨hal-02362577⟩
  • Justine Largillière, Rémy Le Meur, Martine Cadene, Bertrand Castaing, Karine Loth, et al.. Premières études cinétiques du mécanisme d’échange de chaînes de la protéine HU d’Escherischia coli.. 16e colloque scientifique de l’ADOC : Converger pour Renforcer, Apr 2018, Orléans, France. ⟨hal-02362579⟩
  • Justine Largillière, Rémy Le Meur, David Guinguène, Norbert Garnier, Celine Landon, et al.. To a complete kinetics and structural description of the EcHU chain exchange system.. 31e colloque Biotechnocentre, Oct 2018, Seillac, France. ⟨hal-02362818⟩
  • Karine Loth, Justine Largillière, Franck Coste, Françoise Culard, Celine Landon, et al.. New protein-DNA complexes in archaea: a small monomeric protein induces a sharp V-turn DNA structure.. EuroMar 2018, Jul 2018, Nantes, France. ⟨hal-02362581⟩
  • F. Coste, G. Chaume, J.-B. Madinier, I. Rahioui, B. Castaing, et al.. Incorporation of trifluoromethylated pseudoproline in an entomotoxic knottin: effects on oxidative folding, 3D structure and biological activity. 35th European Peptide Symposium (EPS35), Aug 2018, Dublin, Ireland. ⟨hal-02894161⟩
  • J. Cros, F. Coste, Z. Tber, S. Goffinont, V. Nadan, et al.. Search for small molecule inhibitors of DNA glycosylases, pertinent therapeutic targets in cancer and neurodegenerative disease therapies. 5e Colloque annuel du Laboratoire International Associé (LIA) MiR-TANGo, May 2018, Orléans, France. ⟨hal-02904701⟩
  • J. Cros, F. Coste, S. Goffinont, V. Gaudon, V. Roy, et al.. Recherche d’inhibiteurs des enzymes de réparation de l’ADN hNeil1 et hOGG1, de nouvelles cibles pertinentes pour le développement de thérapies anticancéreuses. 31e colloque Biotechnocentre, Oct 2018, Seillac, France. ⟨hal-02904682⟩
  • Béatrice Vallée, A. Cosson, M. Doudeau, F. Godin, A. Champiré, et al.. Development of small molecule inhibitors of LIM kinases, new therapeutic targets to treat Neurofibromatosis type I. Joint Global Neurofibromatosis Conference 2018, Nov 2018, Paris, France. ⟨hal-02924077⟩
  • A. Braka, S. Aci-Sèche, S. Bourg, Norbert Garnier, P. Bonnet. LIM kinase inhibitors discovery by flexible protein high-throughput virtual screening. Structure-based design of LIM kinase inhibitors. Journée Fédération de recherche “Physique et Chimie du Vivant” FR2708 (CBM/ICOA), Jan 2018, Orléans, France. ⟨hal-02904708⟩
  • Alan Wacquiez, Franck Coste, Caroline Blondeau, Emmanuel Kut, Virginie Nadan, et al.. NS1 des virus Influenza A : approches structurales et fonctionnelles pour de nouvelles stratégies anti-virales. 20. Journées Francophones de Virologie 2018, Mar 2018, Paris, France. John Libbey Eurotext, Virologie, 22, 148 p., 2018. ⟨hal-02736544⟩
  • Alan Wacquiez, Stéphane Goffinont, Virginie Nadan, Franck Coste, Emmanuel Kut, et al.. Structures et fonctions de la protéine NS1 des virus influenza pour la recherche de nouvelles cibles thérapeutiques. 31. Colloque Biotechnocentre, Oct 2018, Seillac, France. 2018. ⟨hal-02736195⟩
  • Justine Largillière, Rémy Le Meur, Martine Cadene, Bertrand Castaing, Karine Loth, et al.. Première description cinétique du mécanisme d’échange de chaînes de la protéine HU d'Escherichia coli.. 30ème colloque Biotechnocentre, Oct 2017, Seillac, France. ⟨hal-02361632⟩
  • Karine Loth, Françoise Culard, Justine Largillière, Celine Landon, Bertrand Castaing, et al.. The MC1-DNA complex solution structure reveals that a monomeric protein can induce a U-turn in archaea.. NMR: a tool for biology XTh, Jan 2017, Paris, France. ⟨hal-02361613⟩
  • Karine Loth, Justine Largillière, Franck Coste, A.F. Delmas, Bertrand Castaing, et al.. New protein-DNA complexes in archaea: a monomeric protein induces a U-turn structure.. Le Studium Confenrence: Structural biology and biophysics of RNA-protein complexes, Nov 2017, Orléans, France. ⟨hal-02362576⟩
  • A. Braka, S. Aci-Sèche, S. Bourg, Norbert Garnier, P. Bonnet. Simulation of the protein-ligand association process for kinetics prediction. 20e congrès du Groupe de Graphisme et Modélisation Moléculaire (GGMM), May 2017, Reims, France. ⟨hal-02904825⟩
  • A. Champiré, A. Braka, B. VallÉe, M. Doudeau, F. Godin, et al.. LIM kinases as new therapeutic targets for the treatment of neurofibromatosis type 1. VII International Symposium on Advances in Synthetic and Medicinal Chemistry (EFMC) –, Aug 2017, Vienne, Austria. ⟨hal-02904794⟩
  • A. Braka, S. Aci-Sèche, Norbert Garnier, S. Bourg, P. Bonnet. Kinetic rates prediction of protein kinase inhibitors by enhanced molecular dynamics. K4DD Meeting - Binding kinetics: Time is of the essence, Nov 2017, Berlin, Germany. ⟨hal-02904780⟩
  • A. Wacquiez, F. Coste, C. Blondeau, E. Kut, V. Nadan, et al.. NS1 des virus Influenza A : approches structurales et fonctionnelles pour de nouvelles stratégies anti-virales. Le Studium Conférence « Messenger RNA therapeutics : advances and perspectives », Mar 2017, Orléans, France. ⟨hal-02904828⟩
  • A. Wacquiez, S. Goffinont, V. Nadan, F. Coste, E. Kut, et al.. NS1 des virus influenza : relations structure-fonction pour la recherche de nouveaux anti-viraux. 30e colloque Biotechnocentre, Oct 2017, Seillac, France. ⟨hal-02904785⟩
  • A. Wacquiez, F. Coste, V. Nadan, E. Kut, S. Goffinont, et al.. NS1 of Influenza viruses: structural and functional approaches towards the discovery of novel anti-influenza drugs. Le Studium Conférence “Structural Biology and biophysics of RNA-protein complexes”, Nov 2017, Orléans, France. ⟨hal-02904778⟩
  • A. Wacquiez, F. Coste, C. Blondeau, E. Kut, V. Nadan, et al.. NS1 des virus Influenza A : approches structurales et fonctionnelles pour de nouvelles stratégies anti-virales. Le Studium Conférence « Messenger RNA therapeutics : advances and perspectives », Mar 2017, Orléans, France. ⟨hal-02905177⟩
  • A. Braka, S. Aci-Sèche, S. Bourg, Norbert Garnier, P. Bonnet. Path-based simulation of ligand-receptor binding process for binding kinetics prediction. XXIVe Journées Jeunes Chercheurs (SCT), Feb 2017, Châtenay-Malabry, France. ⟨hal-02904830⟩
  • A. Champiré, A. Braka, Béatrice Vallée, M. Doudeau, F. Godin, et al.. Design, synthesis and biological evaluation of LIMK inhibitors. XXIVe Journées Jeunes Chercheurs (SCT), Feb 2017, Châtenay-Malabry, France. ⟨hal-02904837⟩
  • Alan Wacquiez, Stéphane Goffinont, Virginie Nadan, Franck Coste, Emmanuel Kut, et al.. NS1 des virus influenza : relations structure-fonction pour la recherche de nouveaux anti-viraux. 30. Colloque Biotechnocentre, Oct 2017, Seillac, France. 100 p., 2017. ⟨hal-02737987⟩
  • C. Rieux, F. Coste, F. Culard, S. Goffinont, S. Bourg, et al.. Small-molecule inhibitors of Fpg/Nei DNA glycosylases, enzymes initiating the base excision repair pathway, new targets for cancer therapy. XXII International Roundtable on Nucleosides, Nucleotides and Nucleic Acids, Jul 2016, Paris, France. ⟨hal-02919151⟩
  • A. Braka, S. Aci-Sèche, S. Bourg, Norbert Garnier, P. Bonnet. Etude par simulations de dynamique moléculaire de la cinétique du processus d’association récepteur-ligand. 29e colloque de Biotechnocentre, Oct 2016, Seillac, France. ⟨hal-02904842⟩
  • A. Champiré, A. Braka, Béatrice Vallée, M. Doudeau, F. Godin, et al.. Conception, synthèse et évaluation biologique d’inhibiteurs de LIM kinases. 29e colloque de Biotechnocentre, Oct 2016, Seillac, France. ⟨hal-02904847⟩
  • A. Braka, S. Aci-Sèche, S. Bourg, Norbert Garnier, P. Bonnet. Computational study of ligand-receptor binding process using enhanced molecular dynamics simulations. 21st European Symposium on Quantitative Structure-Activity Relationship, Sep 2016, Vérone, Italy. ⟨hal-02919149⟩
  • Mathieu Galibert, Chrystelle Derache, Franck Coste, Hervé Meudal, Anne-Christine Lalmanach, et al.. Improvement of the chemical production of β-defensins including straightforward attribution of disulfide bridges. 18. Réunion du GFPP, May 2013, Sète, France. 1 p., 2013. ⟨hal-02805308⟩
  • M. Galibert, Chrystelle Derache, F. Coste, H. Meudal, Anne-Christine Lalmanach, et al.. Improvement of the chemical production of β-defensins including straighforward attribution of disulfide bridges. 3. International Symposium on Antimicrobial Peptides: Today knowledge and future applications, Jun 2012, Lille, France. pp.C-43, 2012, AMP 2012 - Antimicrobial peptide symposium. ⟨hal-02748134⟩

Ouvrage (y compris édition critique et traduction)

  • Kadija Essalhi, L. Gellon, Julie Berthault, Françoise Culard, Martine Guerin, et al.. Ogg1, a Saccharomyces cerevisiae bifunctional DNA glycosylase involved in base excision repair of oxidative DNA damage, interacts with the replicative DNA polymerase, Pol epsilon. pp.409, 2011. ⟨hal-00614891⟩

Chapitre d'ouvrage

  • F. d'Heygère, A. Schwartz, F. Coste, B. Castaing, M. Boudvillain. Monitoring RNA Unwinding by the Transcription Termination Factor Rho from Mycobacterium tuberculosis. Methods in Mecular Biology, 1259, Springer, pp.293-311, 2015, RNA remodelling proteins (Boudvillain, ed), 978-1-4939-2213-0. ⟨10.1007/978-1-4939-2214-7_18⟩. ⟨hal-01174055⟩
  • L. Chevillard, B. Castaing, E. Leveque, A. Arneodo. Phenomenological relation between the Kolmogorov constant and the skewness in turbulence. Eckhardt, B. Advances in Turbulence Xii - Proceedings of the 12th Euromech European Turbulence Conference, 132, Springer-Verlag Berlin, pp.719-720, 2009, Springer Proceedings in Physics, 978-3-642-03085-7; 978-3-642-03084-0. ⟨10.1007/978-3-642-03085-7_174⟩. ⟨hal-01557098⟩
  • Evelyne Sage, Bertrand Castaing. Radiation damage to biomolecules, radioprotection and radiotherapy. Genome maintenance mechanisms in response to radiation-induced DNA damage. Mélanie Spotheim-Maurizot. Radiation chemistry from basics to applications in material and life sciences, EDP Sciences, pp.219-232, 2008. ⟨hal-00284342⟩
  • Norbert Garnier, D. Genest, M. Genest. Motions and correlations of the transmembrane domain of a protein receptor studied by molecular dynamics simulation. Nonlinear excitations in biomolecules, Springer Berlin Heidelberg, pp.241-246, 1994. ⟨hal-02123780⟩